PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT16619
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 136aa    MW: 14796.1 Da    PI: 7.5696
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT16619genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY68.78.8e-224499258
              --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
      WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
              +Dgy+W+KYGqK +k+ +  rsY+rC  ++C +kkkve +  dp++  ++Y g H+h
  EMT16619 44 EDGYQWKKYGQKFIKNIQKIRSYFRCRDKRCGAKKKVEWQPGDPNL-RVVYDGAHQH 99
              7****************************************99985.899******9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081118.23438102IPR003657WRKY domain
SuperFamilySSF1182901.19E-2041102IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.3E-2341102IPR003657WRKY domain
SMARTSM007742.4E-2143101IPR003657WRKY domain
PfamPF031061.8E-204499IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MASTSQPPTT GNEGGERGHH GDEEEQQQGA WAEAAGGQPL VMPEDGYQWK KYGQKFIKNI  60
QKIRSYFRCR DKRCGAKKKV EWQPGDPNLR VVYDGAHQHG SPSSNGGGQD ADGAANRYDL  120
STQYFGGAGA PTPQTQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ8063891e-101JQ806389.1 Hordeum vulgare WRKY transcript factor 48 (WRKY48) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010231847.11e-56PREDICTED: probable WRKY transcription factor 2
TrEMBLR7WD668e-98R7WD66_AEGTA; Uncharacterized protein
STRINGBRADI1G13207.13e-56(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101583444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.27e-15WRKY DNA-binding protein 57